Yes, this is already included in the "SA" (surface area) part of MM-GBSA.
On Sep 4, 2016 4:37 PM, "Atila Petrosian" <atila.petrosian.gmail.com> wrote:
> Dear amber users,
>
> I want to use MM-GBSA methods for binding of some inhibitors to an enzyme.
>
> Is it possible to consider and calculate hydrophobic interactions in this
> method?
>
> Any help will highly be appreciated.
>
> Best,
> Atila
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Received on Sun Sep 04 2016 - 14:30:02 PDT
