Re: [AMBER] MD simulation with non natural amino acid, parameterized using the RED server

From: Hannes Loeffler <Hannes.Loeffler.stfc.ac.uk>
Date: Thu, 18 Aug 2016 10:19:35 +0100

Hi,

I don't recall the frcmod format at the moment but wouldn't the
the -2 in following lines

CT-NT-P -O2 1 3.00000000e+00 180.0 -2.
CT-NT-P -OS 6 1.80000000e+01 180.0 2.

mean that another torsion for CT-NT-P -O2 would need to be read so that
CT-NT-P -OS is effectively ignored and the second line is interpreted
as being another term for the first on? The desc output seems to
suggest that at least.

Cheers,
Hannes.

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Received on Thu Aug 18 2016 - 02:30:04 PDT
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