Re: [AMBER] intel MPI failed

From: Daniel Roe <daniel.r.roe.gmail.com>
Date: Mon, 8 Aug 2016 08:16:04 -0600

On Mon, Aug 8, 2016 at 7:40 AM, Albert <mailmd2011.gmail.com> wrote:
> > mpicc -show
> gcc
> -I/soft/intel/compilers_and_libraries_2016.3.210/linux/mpi/intel64/include

This could be the problem right here. You're configuring for 'intel'
but your mpicc is trying to use gcc (i.e. GNU compilers). Check your
system setup.

-Dan

> -L/soft/intel/compilers_and_libraries_2016.3.210/linux/mpi/intel64/lib/release_mt
> -L/soft/intel/compilers_and_libraries_2016.3.210/linux/mpi/intel64/lib
> -Xlinker --enable-new-dtags -Xlinker -rpath -Xlinker
> /soft/intel/compilers_and_libraries_2016.3.210/linux/mpi/intel64/lib/release_mt
> -Xlinker -rpath -Xlinker
> /soft/intel/compilers_and_libraries_2016.3.210/linux/mpi/intel64/lib
> -Xlinker -rpath -Xlinker /opt/intel/mpi-rt/5.1/intel64/lib/release_mt
> -Xlinker -rpath -Xlinker /opt/intel/mpi-rt/5.1/intel64/lib -lmpifort
> -lmpi -lmpigi -ldl -lrt -lpthread
>
> I am just wondering how can we solve the problem?
>
> Thank you very much.
>
> Albert
>
>
>
>
>
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> http://lists.ambermd.org/mailman/listinfo/amber



-- 
-------------------------
Daniel R. Roe, PhD
Department of Medicinal Chemistry
University of Utah
30 South 2000 East, Room 307
Salt Lake City, UT 84112-5820
http://home.chpc.utah.edu/~cheatham/
(801) 587-9652
(801) 585-6208 (Fax)
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Received on Mon Aug 08 2016 - 07:30:02 PDT
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