On Mon, Aug 01, 2016, Ruth Helena Tichauer wrote:
>
> It would save me two months' work so I guess I’ll try this out and I
> hope it will work without a huge bias of the results..
Why two months? Generally you should equilibrate the new water box using
MM alone (perhaps with restraints to keep what used to be the QM part fixed.)
Then, go back to the QM/MM calculations.
...dac
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Mon Aug 01 2016 - 08:00:05 PDT