It works now. Thanks.
Slava Chushak
--------------------------------------------
On Fri, 7/8/16, David A Case <david.case.rutgers.edu> wrote:
Subject: Re: [AMBER] Library errors while using NAB on Amber16
To: "Slava Chushak" <chushak.yahoo.com>, "AMBER Mailing List" <amber.ambermd.org>
Date: Friday, July 8, 2016, 4:22 PM
On Fri, Jul 08, 2016,
Slava Chushak wrote:
> I
want to make some basepairs as you did in program_8.nab for
RNA.
> I'm using:
> setboundsfromdb(b, m, "1:9:",
"1:33:", "adna.basepair.db", 1.0);
>
> and I'm
getting:
> setboundsfromdb:
adna.basepair.db, 1:9: -> 1:33: (DT -> DA)
> setboundsfromdb: Couldn't find entry
for D:P-D:P in adna.basepair.db: 1:9:P 1:33:P
Please try the attached patch
(similar to the last one). Do this
cd $AMBEHROME
patch -p0 <
setbounds.patch
...thanks
for the report....dac
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Received on Mon Jul 11 2016 - 07:30:03 PDT
