Re: [AMBER] VMD

From: Daniel Roe <daniel.r.roe.gmail.com>
Date: Thu, 7 Jul 2016 10:48:08 -0600

Hi,

You probably would get a better response on the VMD mailing list:
http://www.ks.uiuc.edu/Research/vmd/mailing_list/

-Dan

On Thu, Jul 7, 2016 at 10:44 AM, Thakur, Abhishek <axt651.miami.edu> wrote:
> Hi
>
> I don't know that posting this qustion on this platform is suitable or not.
>
> I am trying to make movie by VMD from crd file.
>
> But I noticed that my heteroatom is not visible
>
>
> I have loaded the molecule in VMD, from the menu bar select Graphics->Representations... In the box labeled Selected Atoms, typed "hetero" and hit enter. Then I should see only my ligand (but nothing was visible) then I Create Rep and enter "protein" in the Selected Atoms box and hit enter (could see only protein)
>
>
> I am not getting that how to make by heteroatom visible.
>
>
> Thanking,
>
> -AT
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> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber



-- 
-------------------------
Daniel R. Roe, PhD
Department of Medicinal Chemistry
University of Utah
30 South 2000 East, Room 307
Salt Lake City, UT 84112-5820
http://home.chpc.utah.edu/~cheatham/
(801) 587-9652
(801) 585-6208 (Fax)
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Received on Thu Jul 07 2016 - 10:00:03 PDT
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