Re: [AMBER] re-imaging bilayer

From: Daniel Roe <daniel.r.roe.gmail.com>
Date: Thu, 7 Jul 2016 08:37:57 -0600

Hi,

On Thu, Jul 7, 2016 at 7:41 AM, Sally Pias <sallypias.gmail.com> wrote:
>
> "Autoimage" does a great job but splits the water unevenly on the two sides
> of the bilayer, leaving a very thin water layer on one side. It does so

What if after you 'autoimage', you then re-center the bilayer (with
'center') and then 'image' *only* the water?

-Dan 

-- 
-------------------------
Daniel R. Roe, PhD
Department of Medicinal Chemistry
University of Utah
30 South 2000 East, Room 307
Salt Lake City, UT 84112-5820
http://home.chpc.utah.edu/~cheatham/
(801) 587-9652
(801) 585-6208 (Fax)
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Received on Thu Jul 07 2016 - 08:00:02 PDT
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