[AMBER] .nc trajectory format

From: Neha Gandhi <n.gandhiau.gmail.com>
Date: Wed, 18 May 2016 14:35:01 +1000

Dear List,

I was following gamd tutorial using AMBER14 and AmberTools15 (after apply
patches). Most of the time I save trajectory files in .mdcrd format whereas
I tried saving as .nc (according to the tutorial).

I am now trying to do post-processing using cpptraj. I get error regarding
atom number mismatch between prmtop and .nc trajectory. The .rst file also
has same number of atoms as in original coordinate file and prmtop file.

Am I missing out on something? Your help is appreciated.

Dr. Neha S. Gandhi,
Vice Chancellor's Research Fellow,
Queensland University of Technology,
2 George Street, Brisbane, QLD 4000
Research Gate
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Received on Tue May 17 2016 - 22:30:04 PDT
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