[AMBER] Problem interpreting cpptraj hbond output file

From: maryam azimzadehirani <maryamai1988.gmail.com>
Date: Tue, 3 May 2016 20:00:03 +0800

Dear amber users,
this is my cpptraj output file for one residue:
I am not sure what does count and frac columns present? first thought count
should be number of frames that we see this Hbond, but for some residues I
get the count number larger than my total number of frames. does this means
there is something wrong with my analysis?

#Solute-Solvent Hbonds:
#Acceptor DonorH Donor Count Frac
AvgDist AvgAng
SER_11.O SolventH SolventDnr 112 1.1200
2.7462 158.7748
SolventAcc SER_11.HG SER_11.OG 77 0.7700
2.7717 161.6080
SER_11.OG SolventH SolventDnr 66 0.6600
2.8063 159.1450
SolventAcc SER_11.H SER_11.N 42 0.4200
2.8861 159.3242

Regards,
Maryam
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Received on Tue May 03 2016 - 05:30:03 PDT
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