Re: [AMBER] Could not find angle parameter

From: David A Case <david.case.rutgers.edu>
Date: Wed, 13 Apr 2016 08:34:49 -0400

On Mon, Apr 11, 2016, Jesmita Dhar wrote:

> I am very new to amber. I have checked the mol2 fie, it seems
> correct. I generate parameter file using antechember, but I run tleap
> it will give the follwing error
> Could not find angle parameter: ce - c2 - ce
> Could not find angle parameter: c2 - ce - c2
> Here I am sending the mol2 file and parameter file

How did you create your frcmod file? If I run the command:

  parmchk2 -i Mol-sm_m1-c1.mol2 -f mol2 -o frcmod.dac

I get a different file from yours, and it contains the angle parameters
listed above as "missing". I've attached my parmchk2 output.

Things to check: did you run parmchk2 as above? What version of AmberTools
are you using?

...dac



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Received on Wed Apr 13 2016 - 06:00:04 PDT
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