Re: [AMBER] errors in plumed and amber14 patch

From: Jason Swails <jason.swails.gmail.com>
Date: Thu, 17 Mar 2016 06:02:26 -0400

I also highly recommend that you upgrade to AmberTools 15. It is bundled
with PLUMED support (so there is no need to patch the source code before
compiling it). It worked great last time I tried it.

HTH,
Jason

On Thu, Mar 17, 2016 at 4:41 AM, <hannes.loeffler.stfc.ac.uk> wrote:

>
> > const&, PLMD::Matrix<double>&)]+0x4ef): undefined reference to `dgetri_'
> > collect2: ld returned 1 exit status
>
> This is the linker complaining that the symbol dgetri_ cannot get resolved
> (you don't show the relevant command line that was used to link the object
> files). You need to make sure that the linker uses the proper library for
> that. I think dgetri is a LAPACK function.
>
> Your shell script does not seem to have any relevant compiled time options.
> _______________________________________________
> AMBER mailing list
> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber
>
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Thu Mar 17 2016 - 03:30:03 PDT
Custom Search