$ /opt/amber14/bin/ambpdb -p m1_watoct.prmtop < hold1.rst > hold1.pdb
| ambpdb (C++) Version V15.00
| Reading Amber restart from STDIN
Error: Could not read restart atoms/time.
On Wed, Mar 9, 2016 at 10:25 PM, Bill Ross <ross.cgl.ucsf.edu> wrote:
> Please copy/paste your command line and result.
>
> Thanks,
> Bill
>
> On 3/9/16 7:07 PM, Bin Wang wrote:
> > Dear Amber users,
> >
> > I am running the 'hold" step in the lipid bilayer simulation. After this
> > run was finished, I try to use ambpdb to check the result, but I got a
> > error message: "Error: Could not read restart atoms/time." The hold.out
> > file looks ok, but I can not get the pdb file, and cannot see the
> > trajectories using VMD. Could anybody let me know what went wrong? Thank
> > you in advance.
> >
> >
> > Best,
> >
> > Bin
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>
>
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Received on Wed Mar 09 2016 - 20:00:03 PST
