[AMBER] tests dont work for serial, parallel or cuda amber instalation.

From: Wesley Alves <wesley.diatom.gmail.com>
Date: Mon, 7 Mar 2016 17:20:05 -0300

Hi Dears,
I am trying to install amber14 with ambertools15, in Linux OpenSUSE system,
with AMD processor (8 cores), 32 GB of memory, NVIDIA GTX 670, and 2 NVIDIA
Tesla k-20.

I had completed the instalation of modules serial, parallel (-mpi) and
cuda, according the manual instructions. However, the test of all instaled
modules was failed, with the same error at make test command.

> export DO_PARALLEL="mpirun -np 2"
> make test
(cd AmberTools/test && make test)
make[1]: Entering directory '/home/labime/amber14/AmberTools/test'
./test_at_serial.sh

Warning: DO_PARALLEL is set to "mpirun -np 2".
This environment variable is being unset for serial testing.

ValueError: numpy.dtype has the wrong size, try recompiling
Makefile:6: recipe for target 'test' failed
make[1]: *** [test] Error 1
make[1]: Leaving directory '/home/labime/amber14/AmberTools/test'
Makefile:43: recipe for target 'test.serial' failed
make: *** [test.serial] Error 2

Can you help me ???
Thanks for attention.
Wesley
-- 
Wesley Júnio Alves da Conceição
Undergraduate Biophysics Student
Laboratory for Molecular Modelling and Dynamics - Carlos Chagas Filho
Biophysics Institute
Laboratory for Structural Molecular Biology - Pharmacy Faculty
Federal University of Rio de Janeiro
Rio de Janeiro - RJ
Brazil
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Mon Mar 07 2016 - 12:30:03 PST
Custom Search