can you please post exact script and command you used?
Hai
On Fri, Mar 4, 2016 at 12:04 AM, Sreemol G <sreemolinfo.gmail.com> wrote:
> Dear Bill,
> I have loaded parameter file for ions using this command "loadmaberparams
> frcmod.ionsjc_tip3p".
>
> On Fri, Mar 4, 2016 at 10:25 AM, Bill Ross <ross.cgl.ucsf.edu> wrote:
>
> > You have to load a parameter file for ions. Search the list or web for
> > the error message in your screenshot and you will find more detail.
> >
> > Bill
> >
> > On 3/3/16 8:40 PM, Sreemol G wrote:
> > > Dear AMBER users,
> > > I'm new to amber. I have downloaded and installed AmberTools15 but i
> > didn't
> > > have licensed Amber 14. I have tried to run the tutorial " setting up
> > > duplex DNA: polyA-polyT". I have used the "leaprc.ff14SB" force field
> and
> > > "loadamberparams frcmod.ionsjc_tip3p" model. I could generate prmtop
> and
> > > inpcrd files. But after adding ions while running "saveamberparm dna1
> > > polyAT_cio.prmtop
> > > polyAT_cio.inpcrd" for neutralised system, I'm getting following error.
> > >
> > >
> > > Is it because of not having licensed Amber 14 or any other errors in
> > input.
> > >
> > > .
> > >
> > >
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> >
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> >
>
>
>
> --
> With kind regards,
> G. Sreemol
> M.Tech (Computational Biology)
> Anna university
> Chennai.
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Received on Thu Mar 03 2016 - 21:30:04 PST
