Re: [AMBER] Fail to start nab

From: Bill Ross <ross.cgl.ucsf.edu>
Date: Mon, 18 Jan 2016 02:44:35 -0800

You need to add the executable dir to your path (unix term). It would be
described wherever you see instructions for setting AMBERHOME.

Bill

On 1/18/16 2:32 AM, Nikolay N. Kuzmich wrote:
> Dear Amber users,
>
> in course of DNA polyA-polyT Decamer tutorial
> when I tried to start nuc.nab file I got this:
>
> nikolay/amber14% nab nuc.nab
> nab: Command not found.
>
> The AMBERHOME environment variable has been set.
> The nuc.nab file was created in /home/nikolay/amber14/ folder
> just as
>
> molecule m;
>
> m = fd_helix( "abdna", "aaaaaaaaaa", "dna" );
> putpdb( "nuc.pdb", m, "-wwpdb");
>
> How could I fix this problem?
>
> Kind regards,
> Nick
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Received on Mon Jan 18 2016 - 03:00:04 PST
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