Dear David and Jason,
Very thanks for your time and consideration.
I Upgraded to AmberTools 14. Unfortunately, I still have the previous
problems.
I checked lig_h.pdb, lig_h.mol2, lig_h.lib and comp.pdb.
Ligand section is the same in both of the lig_h.pdb and comp.pdb files.
Please find the important files in following link:
https://www.dropbox.com/s/747h5yjz0r6iedn/important%20files.rar?dl=0
Best,
Atila
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Received on Fri Sep 18 2015 - 11:00:06 PDT