[AMBER] lifetime analysis

From: loic etheve <loic.etheve.ibcp.fr>
Date: Wed, 2 Sep 2015 15:37:45 +0200

Dear users,

I try to use lifetime command with option fuzz but i have a warning.

This is my input command :

trajin 1skn_500ns-W.trj
hbond HB out hb86.txt dist 3.5 series donormask :86,98 acceptormask
:1-34.N*,O* avgout test86-98.dat angle 135
go
writedata solutehb86-98.dat HB[solutehb]
lifetime HB[solutehb] out life86-98.dat4 fuzz 2

and this is the result :

Warning: 'fuzzCut' selects no data sets.
Warning: '1' selects no data sets.
     LIFETIME: Calculating average lifetime using a cutoff of 0.500000
of data in 97 sets
     Values greater than 0.500000 are considered present.
     Outfile: life86-98.dat

Can someone telle me what's wrong?

Thanks

_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Wed Sep 02 2015 - 07:00:04 PDT
Custom Search