Re: [AMBER] Regarding ADP molecule force fields

From: Jason Swails <jason.swails.gmail.com>
Date: Fri, 31 Jul 2015 08:19:26 -0400

On Fri, 2015-07-31 at 15:11 +0530, Yogeeshwar Ajjugal wrote:
> Dear Amber community,
>
> Iam using FF99SB force fields. i
> want to know whether it contains ADP molecule force fields are not?

No.

> If not
> how can i get ADP force fields?

The Bryce group keeps a database of Amber parameters that contains ADP.
You can get the residue template (as a prep file) and the frcmod from
there: http://www.pharmacy.manchester.ac.uk/bryce/amber/

HTH,
Jason

-- 
Jason M. Swails
BioMaPS,
Rutgers University
Postdoctoral Researcher
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Received on Fri Jul 31 2015 - 05:30:03 PDT
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