Re: [AMBER] NetCDF file

From: Hannes Loeffler <>
Date: Wed, 15 Jul 2015 15:33:46 +0100

On Wed, 15 Jul 2015 16:21:16 +0200
Marta Wisniewska <> wrote:

> Dear Amber Users,
> Is it any possibility to open NetCDF format file of trajectory in VMD
> or convert it to crd format? I'd like to analyse trajectory of my
> molecule.

Yes, either add ".nc" as extension to your trajectory or use -netcdf on
the command line. When you use the Molecule File Browser you can just
choose "NetCDF (AMBER,MMTK)" from file types.

Wnat analysis does vmd have cpptraj doesn't?


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Received on Wed Jul 15 2015 - 08:00:02 PDT
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