Dear all,
for calculating the diffusion it is recommended to avoid thermoast, barostat and wrapping so the use of NVE ensemble is necessary in order to compare to experimental values 
However, in NVE there is  the energy drift issue, which can be due to numerical rounding, the choice of few control inputs : 
dsum_tol ,  tol  and nscm flag for the removal of trans/rot of COM 
my question is what is  acceptable drift in energy for the calculated diffusion to be correct 
ps. there is also other output frequency and system size 
Thanks
Fatima 
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Received on Tue Jul 14 2015 - 11:30:03 PDT