Dear Amber users,
I am working with protein model building. I am planning to do MD simulation
of crystal structure and three different models of same protein. I just
have a quick query here regarding adding hydrogen to the structure. Do I
need to worry about the residue flipping while adding hydrogen, which
usually been done with programs like MolProbity? Will it be correct if I
directly add hydrogen through Amber leap program?
Many thanks in advance
Anu
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Received on Sat Jul 11 2015 - 13:30:03 PDT