Re: [AMBER] About python usage in AmberTools

From: Hai Nguyen <nhai.qn.gmail.com>
Date: Wed, 8 Jul 2015 12:42:10 -0400

On Wed, Jul 8, 2015 at 10:26 AM, Juan Eiros Zamora <
j.eiros-zamora14.imperial.ac.uk> wrote:

>
> > ‚ÄčNot necessarily a mistake. Look at config.h and search for the PYTHON
> > variable. What does it point to?
> >
> 192 #Python interpreter we are using
> 193 PYTHON=/home/je714/anaconda3/envs/py27/bin/python2.7
> 194
> 195 #Type of Amber_Phenix build and python include file
> 196 AMBERPHENIX=no
> 197 INCLUDE_PY=/home/je714/anaconda3/envs/py27/include/python2.7
> 198 PYTHON_VER=2.7
> 199 PHENIX_INC=
> 200 PHENIX_REPO=
>
> So it seems to have picked it up correctly.
>
> But the first line of the mdout_analyzer.py script is setting up a wrong
> python I think:
>
>

> #!/usr/local/bin/python2.7
>
>
Yes I think this will use default python2.7. You can delete this line or
change to "#!/usr/bin/env python"

Hai

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Received on Wed Jul 08 2015 - 10:00:03 PDT
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