I am currently using gcc-4.4.7 20120313 (Red Hat 4.47-3).
On Tue, Jun 30, 2015 at 7:40 PM, Jason Swails <jason.swails.gmail.com>
wrote:
> What version of gcc are you using?
>
> On Tue, Jun 30, 2015 at 6:06 PM, Jim Wu <jwu.g.hmc.edu> wrote:
>
> > Hi,
> >
> > I am trying to configure Amber with ./configure gnu and I run into the
> > following error:
> >
> > Checking NetCDF...
> > Using bundled NetCDF library.
> > Starting NetCDF build.
> > Configuring NetCDF C interface (may be time-consuming)...
> > Compiling the NetCDF C interface (may be time-consuming)...
> > Error: NetCDF C compile failed.
> >
> > It says to check the netcdf.c.compile.log and the bottom of the file
> shows
> > the following:
> >
> > ncgentab.o: In function `ignore':
> > ncgentab.c:(.text+0x3ff6): undefined reference to `yyunput'
> > collect2: ld returned 1 exit status
> > make[1]: *** [ncgen3] Error 1
> > make[1]: Leaving directory
> > `/home.dft/jwu/amber14/AmberTools/src/netcdf-4.3.0/ncgen3'
> > make: *** [install-recursive] Error 1
> >
> > I am not sure what is going on and I have no ideas on how to fix this.
> Can
> > someone help me address this issue?
> >
> > Thanks,
> > Jim
> > _______________________________________________
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> > AMBER.ambermd.org
> > http://lists.ambermd.org/mailman/listinfo/amber
> >
>
>
>
> --
> Jason M. Swails
> BioMaPS,
> Rutgers University
> Postdoctoral Researcher
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>
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Received on Tue Jun 30 2015 - 20:00:03 PDT
