[AMBER] Compile Failure

From: Jim Wu <jwu.g.hmc.edu>
Date: Tue, 30 Jun 2015 15:06:36 -0700

Hi,

I am trying to configure Amber with ./configure gnu and I run into the
following error:

Checking NetCDF...
        Using bundled NetCDF library.
        Starting NetCDF build.
        Configuring NetCDF C interface (may be time-consuming)...
        Compiling the NetCDF C interface (may be time-consuming)...
Error: NetCDF C compile failed.

It says to check the netcdf.c.compile.log and the bottom of the file shows
the following:

ncgentab.o: In function `ignore':
ncgentab.c:(.text+0x3ff6): undefined reference to `yyunput'
collect2: ld returned 1 exit status
make[1]: *** [ncgen3] Error 1
make[1]: Leaving directory
`/home.dft/jwu/amber14/AmberTools/src/netcdf-4.3.0/ncgen3'
make: *** [install-recursive] Error 1

I am not sure what is going on and I have no ideas on how to fix this. Can
someone help me address this issue?

Thanks,
Jim
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Tue Jun 30 2015 - 15:30:03 PDT
Custom Search