[AMBER] subroutine qm_write_pdb

From: Hector A. Baldoni <hbaldoni.unsl.edu.ar>
Date: Wed, 17 Jun 2015 10:30:25 -0300 (ARGSL-ST)

Dear professor Walker,

When running qm/mm the subroutine qm_write_pdb in the sqm program is
called to the bigining of the calculation to print a qmmm_region.pdb file
including link atoms. However, such coordinate file is not updated anymore
over the run.

Would you suggest me how to patch or where to place a call the
qm_write_pdb subroutine to print the updated QM region pdb coordinates
every nstep.

Greeting,
Hector.



--------------------------------------
 Dr. Hector A. Baldoni
 Area de Quimica General e Inorganica
 Universidad Nacional de San Luis
 Chacabuco 917 (D5700BWS)
 San Luis - Argentina
 hbaldoni at unsl dot edu dot ar
 Tel.:+54-(0)266-4520300 ext. 6157
--------------------------------------
 AND ALL THIS SCIENCE I DON'T UNDERSTAND IT'S JUST MY JOB FIVE DAYS A WEEK.
 -- ELTON JOHN, "ROCKET MAN"



_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Wed Jun 17 2015 - 07:00:02 PDT
Custom Search