[AMBER] Problem generating peptide

From: Harshala Haldankar <harshala7h.gmail.com>
Date: Tue, 16 Jun 2015 17:08:50 +0530


I am doing lipid bilayer simulation (POPG/POPE) on my peptide (18-mer)
using AMBER14.

I am following An Amber Lipid Force Field Tutorial: Lipid14 Edition

According to the tutorial, I had used charmm gui to build the
protein/membrane system, However, I am not able to rename the engineered
residues (ACE and NME) and therefore couldn't cap the terminals of peptide.
Can anybody please help me to cap the peptide using ACE and NME terminals
using charmm-gui.
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Received on Tue Jun 16 2015 - 05:00:03 PDT
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