[AMBER] problem in .pdb after md simulation

From: Vishal Nemaysh <vishal.bioinfotech.gmail.com>
Date: Tue, 16 Jun 2015 12:22:58 +0530

Hi,
 i have simulate my protein in 10ns. but after that the structure geometry
is looking somewhat like bunches of sticks in .pdb structure is appear ..
please suggest me how to resolve this..
the .PDB file is attached here with..

thanking you,


-- 
Vishal
Research Scholar,
Neuropharmaceutical Chemistry lab.,
Dr. B. R. Ambedkar Center for Biomedical Research,
University of Delhi, Delhi-110007
Email: *vishal.bioinfotech.gmail.com <vishal.bioinfotech.gmail.com>*
Phone: 91-11-27662778 Mobile: 91+9650736653



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Received on Tue Jun 16 2015 - 00:00:02 PDT
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