[AMBER] concave edge on torus has mismatched atoms

From: Sylvester Tumusiime <stumusii.uno.edu>
Date: Tue, 24 Mar 2015 19:28:12 +0000

   Dear Amber users,
   I have run a cpptraj command to trajin my netcdf files, trajout a composite
   netcdf file and then determine radial distribution, hbonding, molecular
   surface area and energy in my system.
   I have looked in my output file and i see the following error:

   ----- [prod3.netcdf] (1-1000, 1) -----

    0% concave edge on torus has mismatched atoms

   torus 11 atoms 0 13

   edge 22 vert1.atom 4 vert2.atom 13

   concave edge on torus has mismatched atoms

   torus 11 atoms 0 13

   I would appreciate any help with this.

   Thank you very much,

   Sylvester
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Received on Tue Mar 24 2015 - 12:30:04 PDT
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