On Mon, Mar 23, 2015 at 10:52 AM, Hannes Loeffler <
Hannes.Loeffler.stfc.ac.uk> wrote:
> On Mon, 23 Mar 2015 10:41:10 -0400
> Jason Swails <jason.swails.gmail.com> wrote:
>
> > But it turns out to be a command launched from within FEW.pl
> > somewhere. Ack... I see no way to get around this without
> > changing /bin/sh to point to bash instead of dash.
>
> I suspect it's line 1100 in ./libs/check_input.pm (exec to antechamber).
> Apparently dash doesn't like the >& redirection (for both stdout and
> stderr).
>
Yes, >& is bash only (and csh, I think, but it's not POSIX sh). A quick
grep reveals a large number of >& used in FEW, all of which will need to be
changed to play nicely with Linux distros that use dash.
Thanks,
Jason
--
Jason M. Swails
BioMaPS,
Rutgers University
Postdoctoral Researcher
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Received on Mon Mar 23 2015 - 08:30:02 PDT
