Dear All,
I have been trying to follow
Tutorial A24
Free energy calculations with the Free Energy Workflow Tool (FEW)
By: Nadine Homeyer and Holger Gohlke
I used Ubuntu Linux workstation with Bash shell,
where I have academic licensed Amber14 and AmberTools14.
Adopting the paths changes ( also in leap_am1) as requested in tutorial
I used the command:
perl ~/amber14/AmberTools/src/FEW/FEW.pl MMPBSA /home/shokhen/tutorial/cfiles/leap_am1
The FEW started and aborted with error message:
##############################################
# #
# #
# FEW #
# Free Energy Workflow #
# #
# #
###############################################
Checking input parameters and files.
sh: 1: Syntax error: Bad fd number
Cannot open file log.txt for reading.
I would appreciate any directions how to solve the problem.
Thank you,
Michael
*****************************
Michael Shokhen, PhD
Associate Professor
Department of Chemistry
Bar Ilan University,
Ramat Gan, 52900
Israel
email: shokhen.mail.biu.ac.il<https://webmail.biu.ac.il/owa/redir.aspx?C=a160ef9b9a6b4d06992402715d3ee465&URL=mailto%3ashokhen%40mail.biu.ac.il>
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Received on Sun Mar 22 2015 - 07:00:02 PDT
