[AMBER] help in hbond analysis

From: Robin Jain <robinjain.chem.gmail.com>
Date: Wed, 18 Mar 2015 11:56:35 +0530

Dear all amber users,

I am simulating a organic solute in 64 methanol. Now i want to do some
hbond analysis for hbond between methanol. For this i used the following

*trajin test.mdcrd*
*hbond :2-65 out x.dat avgout y.dat dist 5.55*

after running i got the output showing hydrogen bond data but the data is
very short and showing only too much frames. How could i got the hydrogen
bond data in all frames.
Plesae help me inthis regard.

Thanking You.
Robin Jain
AMBER mailing list
Received on Tue Mar 17 2015 - 23:30:03 PDT
Custom Search