full  minimization of MMP3 (MMMM): protein, ligand, solvent molecules and added ions
 &cntrl
  imin   = 1,
  maxcyc = 200,
  ncyc   = 50,
  ntb    = 1,
  ntr    = 0,
  cut    = 12.0,
  Drms   = 0.0001,
/
END

