Re: [AMBER] shell scripting within cpptraj input files

From: Marc van der Kamp <>
Date: Wed, 28 Jan 2015 09:35:06 +0000

I'm almost certain that this is not possible.
But a better way to go about it is probably the reverse: incorporate
running (small) cpptraj scripts in a shell script.
(Of course, Dan or others may chime in here)

On 28 January 2015 at 09:21, James Starlight <> wrote:

> Dear Amber users!
> I wonder to ask whether it will possible to add simple shell scripting
> patterns within the cpptraj input files: for instance to define some simple
> variables or to add for and whole looping (what are especially would be
> useful if I try to proceed big number of trajectories).
> Thanks for help,
> James
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Received on Wed Jan 28 2015 - 02:00:02 PST
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