Re: [AMBER] Forcefield for RNA

From: Jason Swails <>
Date: Thu, 23 Oct 2014 07:07:19 -0400

On Thu, 2014-10-23 at 11:22 +0530, Asfa Ali wrote:
> Hi all,
> I wanted to know whether the forcefield ff99bsc0 suitable for RNA
> simulations? Or is ff99SB better?

In addition to advice you have already received, I suggest you look at
the third chapter of the AmberTools manual, which has a lengthy
discussion on force field choices in Amber (along with a set of
references for further study if needed).


Jason M. Swails
Rutgers University
Postdoctoral Researcher
AMBER mailing list
Received on Thu Oct 23 2014 - 04:30:02 PDT
Custom Search