[AMBER] ATOMS DO NOT MATCH BETWEEN PARM AND MIN FILES 46946 0

From: Hirdesh Kumar <hirdesh.iitd.gmail.com>
Date: Mon, 13 Oct 2014 22:19:50 +0200

Hi Amber Users,
I am using PMEMD in AMBER 14 to simulate my protein ligand complex. After
equilibration, I am trying to generate the pdb file using ambpdb command.
But it shows error:
ATOMS DO NOT MATCH BETWEEN PARM AND MIN FILES 46946 0..

At next, I tried to generate the pdb file using cpptraj. I got the pdb file
this time and at first glance, there is no error.

Is there any thing wrong with my simulation??

Thanks,
Hirdesh
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Received on Mon Oct 13 2014 - 13:30:03 PDT