Re: [AMBER] force field for lithium ion

From: Mohd Farid Ismail <mohd.farid.ismail.yandex.com>
Date: Fri, 10 Oct 2014 07:38:58 +0800

   The way I did it in leap:
   loadoff ions08.lib
   loadamberparams frcmod.ionsXXXXX
   The XXXXX is replaced with the version you want use, each parametrized
   differently. Look at the frcmod files in $AMBERHOME/dat/leap/parm (this is
   for Amber11, might be different for recent Amber versions).

   I'm in no way claiming that these Li+ ion parameters are suitable for the
   system that you're considering, since AFAIK, these parameters are for
   aqueous systems. I assume you know what you're doing and which parameters
   are suitable for your system.
   HTH,
   Farid
   10.10.2014, 07:11, "Evans, Shalton" <[1]shalton.ccs.msstate.edu>:

     Hello everyone,
     Is there anyone that knows the force field for lithium ions (Li+) and how
     to source it into leap?
     Shalton Evans
     _______________________________________________
     AMBER mailing list
     [2]AMBER.ambermd.org
     [3]http://lists.ambermd.org/mailman/listinfo/amber

   10.10.2014, 07:11, "Evans, Shalton" <[4]shalton.ccs.msstate.edu>:

     Hello everyone,
     Is there anyone that knows the force field for lithium ions (Li+) and how
     to source it into leap?
     Shalton Evans
     _______________________________________________
     AMBER mailing list
     [5]AMBER.ambermd.org
     [6]http://lists.ambermd.org/mailman/listinfo/amber

   --
   Mohd Farid Ismail
   E-mail: [7]mohd.farid.ismail.yandex.com
   Cellphone: 012-251-4565

References

   1. mailto:shalton.ccs.msstate.edu
   2. mailto:AMBER.ambermd.org
   3. http://lists.ambermd.org/mailman/listinfo/amber
   4. mailto:shalton.ccs.msstate.edu
   5. mailto:AMBER.ambermd.org
   6. http://lists.ambermd.org/mailman/listinfo/amber
   7. mailto:mohd.farid.ismail.yandex.com
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Thu Oct 09 2014 - 17:00:02 PDT
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