Dear Amber users!
I need for some utility to quick remove all hydrogens from given pdb
producing new.pdb keeping all residues naming from the input file (it's
important because I need further to add hydrogens back automatically during
further processing of this stripped structures by Tleap).
I've tried to use
reduce -Trim my.pdb > new.pdb
but the resulted new.pdb still consisted of all hydrogens. I'll be thankful
for any (not only amber tools) solutions which can be used as one line
command.
James
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Received on Thu Sep 25 2014 - 01:30:03 PDT
