The decomposition output is in the format of a comma-separated values (CSV)
file. You should be able to open the file in your favorite spreadsheet
program (such as Excel) using comma delimiters that will separate each
value into its own cell for easier reading.
I hope that helps.
-Bill
On Thu, Sep 4, 2014 at 12:47 AM, Nadia Li <amber.nadiali.gmail.com> wrote:
> Dear amber users,
>
> I was calculating energy decomposition using amber 14, but the format of
> the output file is very confusing (see below). It is difficult to get an
> idea of corresponding values. I am wondering if anyone can help with this?
> Thanks a lot.
>
>
>
>
> *Total Energy Decomposition:Residue,Location,Internal,,,van der
> Waals,,,Electrostatic,,,Polar Solvation,,,Non-Polar
> Solv.,,,TOTAL,,,,Avg.,Std. Dev.,Std. Err. of Mean,Avg.,Std. Dev.,Std. Err.
> of Mean,Avg.,Std. Dev.,Std. Err. of Mean,Avg.,Std. Dev.,Std. Err. of
> Mean,Avg.,Std. Dev.,Std. Err. of MeanLEU 30,R LEU
>
> 30,0.0,0.0,0.0,-0.46839669421487606,0.20703596842209954,0.018821451674736322,-0.3577355371900832,0.16788606765397437,0.015262369786724943,0.3176033057851239,0.14043795014279953,0.012767086376618138,-0.01619892892561984,0.01182669847043759,0.0010751544064034173,-0.5247278545454552,0.20332935368895727,0.018484486698996116*
>
> Regards,
> Nadia
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>
--
Bill Miller III
Post-doc
University of Richmond
417-549-0952
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Received on Wed Sep 03 2014 - 22:00:03 PDT
