On Tue, Aug 19, 2014, Urszula Uciechowska wrote:
>
> My mistake, I am using *.rst file
> ambpdb -p *.prmtop <*.rst> *.pdb
Use a text editor to look at your rst file: are there any '*' characters in
it? Anything else that looks unusual? As Jason said, try converting with
cpptraj instead, just to see if that makes a difference. Note that ambpdb
cannot convert restart files created with ntxo=2.
[Aside to Dan: do you have any progress on the ambpdb script that calls
cpptraj? Or documentation about the --ambpdb flag to cpptraj?....thx]
....dac
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Tue Aug 19 2014 - 05:30:03 PDT
