[AMBER] Cluster results

From: Valentina Romano <valentina.romano.unibas.ch>
Date: Wed, 6 Aug 2014 12:22:41 +0000

Dear Amber users

I clustered a MD trajectory using the command cluster in ptraj. I used 5 as number of clusters.

In addition to 5 filename.ci files (e.g. filename.c0, filename.c1 etc), I obtained additional files for each .ci file.
For instance, in addition to filename.c0 I also obtained flilename.c0.1, filename.c0.2 and so on.

Anyone can explain me what these files are?


Valentina Romano | PhD Student | Biozentrum, University of Basel & SIB Swiss Institute of Bioinformatics
Klingelbergstrasse 61 | CH-4056 Basel |

Phone: +41 61 267 15 80

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Received on Wed Aug 06 2014 - 05:30:03 PDT
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