[AMBER] Density Plot

From: Jurgens de Bruin <debruinjj.gmail.com>
Date: Fri, 6 Jun 2014 09:58:32 +0200

Hi All,

Apologies if this may seem trivial.

I am following the guidelines of Tutorial 3 on the AMBER site. I am having
difficulty getting the Density Plot to plateau.
Dis is my parameters currently
&cntrl
  imin=0,irest=1,ntx=5,
  nstlim=500000,dt=0.002,
  ntc=2,ntf=2,
  cut=8.0, ntb=2, ntp=1, taup=2.0, PRES0 = 1.0,
  ntpr=500, ntwx=500,
  ntt=3, gamma_ln=2.0,
  temp0=300.0,
  ntr=1, restraintmask=':1-561',
  restraint_wt=2.0,
  ig=-1
 /

Any help or suggestion would be appreciate...

-- 
Regards/Groete/Mit freundlichen Grüßen/recuerdos/meilleures salutations/
distinti saluti/siong/duì yú/привет
Jurgens de Bruin
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Fri Jun 06 2014 - 03:30:03 PDT
Custom Search