[AMBER] Adenine without ribose ring and/or phosphate groups

From: Valentina Romano <valentina.romano.unibas.ch>
Date: Mon, 24 Mar 2014 16:46:20 +0000

~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Valentina Romano | PhD Student | Biozentrum, University of Basel & SIB Swiss Institute of Bioinformatics
Klingelbergstrasse 61 | CH-4056 Basel |

Phone: +41 61 267 15 80


________________________________________
From: Valentina Romano [valentina.romano.unibas.ch]
Sent: Monday, March 24, 2014 4:20 PM
To: amber.ambermd.org

Dear amber users,


I am trying to parametrize the complex of a protein kinase binds to the adenine base (without any ribose ring and/or phosphate groups)

Do you know how i can create the parameter/topology file for the adenine or if that file already exist?
To my knowledge, it only exists par/top file for "adenine base + ribose+ phospate/s".

Thanks and regards,
Valentina Romano

~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Valentina Romano | PhD Student | Biozentrum, University of Basel & SIB Swiss Institute of Bioinformatics
Klingelbergstrasse 61 | CH-4056 Basel |

Phone: +41 61 267 15 80

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Received on Mon Mar 24 2014 - 10:00:03 PDT
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