Re: [AMBER] ERROR in sidechain.bcl file in MCPB

From: nalini chauhan <nalinichauhan.05.gmail.com>
Date: Mon, 24 Feb 2014 22:53:47 +0530

Respected Sir,

I am working on MCPB and trying to get charge on my protein linked with
zinc ion. While running PROTEIN_sidechain.bcl file, I am getting this
error while building the cluster. Here I am attaching my pdb and .bcl file
and kindly look into it and help me out

 ### ### ### ###
 ### MTK++ Info ###
 ### Function: selection::parse ###
 ### Message: selection string = /PROTEIN/CLR/HE1
 ### ### ### ###

 ### ### ### ###
 ### MTK++ Info ###
 ### Function: selection::parse ###
 ### Message: selection string = /PROTEIN/1/HIE-65
 ### ### ### ###

 ### ### ### ###
 ### MTK++ Error ###
 ### Function: selection::parse ###
 ### Message: Can't find: HIE-65 in molecule: PROTEIN_fixed /col/mol/smol
selection error (4)
 ### ### ### ###

 ### ### ### ###
 ### MTK++ Error ###
 ### Function: MCPB::addToResidue ###
 ### Message: Error in selection parsing
 ### ### ### ###

Thanks,

Regards,
Nalini

Regards,

Nalini


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Received on Mon Feb 24 2014 - 09:30:04 PST
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