[AMBER] LEAP-CHARMM

From: Gözde YALÇIN <yalcingozde88.gmail.com>
Date: Wed, 5 Feb 2014 16:14:10 +0200

Hi,

I would like to implement a MD simulation of a protein embedded in a
POPC+POPE+Cholesterol lipid bilayer. I was able save a pdb for the entire
system. I was wondering if it is possible to parameterize lipid part of
the system in leap using charmm force field. If so, does anyone please let
me know of how to do that?

Cheers.

-- 
Gözde YALÇIN
Research Assistant
Rize Recep Tayyip Erdogan University
Faculty of Engineering
Bioengineering Department
53100 Rize-Turkey
Ph.D. Student in Biotechnology
Ankara University
Biotechnology  Institute
06110 Besevler/Ankara-Turkey
05065055074
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Received on Wed Feb 05 2014 - 07:00:03 PST