Hi, I was running the command ‘distance’ in ptraj between some atoms from the protein to DNA. Surprisingly, the atom O4* can’t be read but O4’ can. Also, some atoms of the protein residues such as NZ of lysine can be read on some lysine residues but not others. Is this a bug?
Regards
Yip Yew Mun
Graduate, PhD
Chemistry and Biological Chemistry
School of Physical and Mathematical Sciences
Nanyang Technological University
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Received on Fri Jan 24 2014 - 18:00:02 PST
