Dear amberists
I have nanotube pdb file with 570 atom, since there isn't any atom type for C in my pdb file,
which program should be used for building input , antechamber or leap?
This is a part of my pdb file that has one residu (CA).
best regards.
ATOM 1 C C A 1 3.917 0.000 0.000 1.00 0.00
ATOM 2 C C A 1 3.725 1.210 2.132 1.00 0.00
ATOM 3 C C A 1 3.917 0.000 1.421 1.00 0.00
ATOM 4 C C A 1 3.725 1.210 3.553 1.00 0.00
ATOM 5 C C A 1 3.917 0.000 4.263 1.00 0.00
ATOM 6 C C A 1 3.725 1.210 6.395 1.00 0.00
ATOM 7 C C A 1 3.917 0.000 5.684 1.00 0.00
ATOM 8 C C A 1 3.725 1.210 7.816 1.00 0.00
ATOM 9 C C A 1 3.917 0.000 8.526 1.00 0.00
ATOM 10 C C A 1 3.917 0.000 9.947 1.00 0.00
ATOM 11 C C A 1 3.169 2.302 0.000 1.00 0.00
ATOM 12 C C A 1 2.302 3.169 2.132 1.00 0.00
ATOM 13 C C A 1 3.169 2.302 1.421 1.00 0.00
ATOM 14 C C A 1 2.302 3.169 3.553 1.00 0.00
Z. Khatti, Ph.D student of Physical Chemistry,
Department of Chemistry, Iran University of Science & Technology,Tehran, Iran
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Received on Wed Dec 25 2013 - 00:30:02 PST
