[AMBER] Plotting a Dynamic Cross Correlation Map

From: Yip Yew Mun <yipy0005.gmail.com>
Date: Fri, 6 Dec 2013 16:28:25 +0800


I have generated a correlation matrix using the following script:


cat << EOF > ana.in
reference equ_avrg.pdb
trajin equ-dry.mdcrd
rms reference .CA
matrix correl .CA out matrix_correl_CA.dat byres
ptraj complex_dry.top ana.in && rm ana.in

I wish to ask how can I plot matrix_correl_CA.dat? (such as gnuplot) Many thanks and appreciation to any help given.

Yip Yew Mun
Graduate, PhD
Chemistry and Biological Chemistry
School of Physical and Mathematical Sciences
Nanyang Technological University
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Received on Fri Dec 06 2013 - 00:30:02 PST
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