I'm sorry I forgot your second question.
-bash-3.2$ make -v
make: Not a recognized flag: v
usage: make [-einqrst] [-k|-S] [-d[A|adg[1|2]mstv]] [-D variable] [-f makefile] [-j [jobs]] [variable=value ...] [target ...]
-bash-3.2$ make --version
make: Not a recognized flag: -
usage: make [-einqrst] [-k|-S] [-d[A|adg[1|2]mstv]] [-D variable] [-f makefile] [-j [jobs]] [variable=value ...] [target ...]
-bash-3.2$
Best regards,
Mengyuan Zhu
From: case<mailto:case.biomaps.rutgers.edu>
Sent: ?Tuesday?, ?December? ?3?, ?2013 ?9?:?23? ?PM
To: amber.ambermd.org<mailto:amber.ambermd.org>
On Tue, Dec 03, 2013, Mengyuan Zhu wrote:
>
> gfortran -DBINTRAJ -c -ffree-form -O3 -I/rc/home/wang/mzhu6/amber12/include -I/rc/home/wang/mzhu6/amber12/include -o pubfft.o pubfft.c
> pubfft.c:6:24: fatal error: ../f2c/f2c.h: No such file or directory
oooh! This is weird. What options did you give to configure?
Try the following: in $AMBERHOME/AmberTools/src/ptraj, type
"mv pubfft.c pubfft.c~". Then try compiling again. I think that pubfft.c
is a leftover from a long time ago, and should never be needed. It certainly
should not be compiled using gfortran!
Can you also see what the output is from typing "make --version"? I must
admit I can't see how the Makefile in ptraj would lead to the command you list
above, but I hope getting rid of pubfft.c will help.
...dac
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Received on Tue Dec 03 2013 - 19:30:02 PST
