Re: [AMBER] mdcrd to dcd

From: Daniel Roe <daniel.r.roe.gmail.com>
Date: Thu, 31 Oct 2013 07:42:45 -0600

Hi,

On Thu, Oct 31, 2013 at 5:36 AM, 石坪江梨花 <13lb010p.rikkyo.ac.jp> wrote:
> Hi
>
> I want a dcd file to use our program.
>
> We usually use VMD to convert mdcrd to dcd.
> VMD needs many time ,
> so I want to know other method.

With cpptraj from AmberTools 13 you can do this from the command line:

cpptraj -p topology.parm7 -y input.mdcrd -x output.dcd

-Dan

-- 
-------------------------
Daniel R. Roe, PhD
Department of Medicinal Chemistry
University of Utah
30 South 2000 East, Room 201
Salt Lake City, UT 84112-5820
http://home.chpc.utah.edu/~cheatham/
(801) 587-9652
(801) 585-6208 (Fax)
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Received on Thu Oct 31 2013 - 07:00:02 PDT