Dear Amber users,
I am working with trimeric protein. I am trying to generate snapshots every
100th frame from simulation trajectories (mdcrd fromat) in PDB format with
the help of PTRAJ. Unfortunately, generated PDB lack TER card in between
the monomers. can anyone help to figure out this problem?
Here is the script I used in PTRAJ.
###############################
trajin ../md1.crd 1 2500 100
trajout md1.pdb pdb
##############################
Many thanks in advance.
Regards
Anu
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Received on Wed Oct 16 2013 - 01:00:02 PDT
